Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Dokdonia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Dokdonia |
| Species | Dokdonia pacifica |
| Strain | strain DSM 25597 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Leptonotus elevatus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1822749 bp
Thymine Count
1814606 bp
Guanine Count
931531 bp
Cytosine Count
951057 bp
Genome Length
5520745 bp
Protein-coding Genes
4863 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate dehydrogenase e2 component (dihydrolipoamide succinyltransferase) | SAMN06265376_101127 | Not Available | Negative | 131777 - 133090 | 48094.1 |
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein/lrp/asnc family transcriptional regulator | SAMN06265376_101128 | Not Available | Positive | 133259 - 133729 | 17649.6 |
| hypothetical protein | SAMN06265376_101129 | Not Available | Negative | 133818 - 133916 | 3839.83 |
| phenylacetic acid degradation protein | SAMN06265376_101130 | Not Available | Negative | 134050 - 134646 | 21632.2 |
| hypothetical protein | SAMN06265376_101131 | Not Available | Positive | 134821 - 135111 | 11308.9 |
| hypothetical protein | SAMN06265376_101132 | Not Available | Positive | 135154 - 135444 | 11435.2 |
| methylglutaconyl-coa hydratase | SAMN06265376_101133 | Not Available | Negative | 135455 - 136207 | 27300.7 |
| putative endonuclease | SAMN06265376_101134 | Not Available | Negative | 136317 - 136568 | 10156.3 |
| oxepin-coa hydrolase / 3-oxo-5,6-dehydrosuberyl-coa semialdehyde dehydrogenase | SAMN06265376_101135 | Not Available | Negative | 136662 - 139196 | 93999.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06265376_101136 | Not Available | Negative | 139255 - 139857 | 21450.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

