Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Dokdonia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Dokdonia |
| Species | Dokdonia pacifica |
| Strain | strain DSM 25597 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Leptonotus elevatus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1822749 bp
Thymine Count
1814606 bp
Guanine Count
931531 bp
Cytosine Count
951057 bp
Genome Length
5520745 bp
Protein-coding Genes
4863 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | SAMN06265376_10157 | Not Available | Negative | 62575 - 65424 | 107092.0 |
| hypothetical protein | SAMN06265376_10158 | Not Available | Negative | 65674 - 66087 | 16270.5 |
| hypothetical protein | SAMN06265376_10159 | Not Available | Negative | 66062 - 66688 | 23351.7 |
| hypothetical protein | SAMN06265376_10160 | Not Available | Negative | 66719 - 67318 | 23946.5 |
| dna adenine methylase | SAMN06265376_10161 | Not Available | Negative | 67351 - 68148 | 30663.9 |
| dna repair protein radc | SAMN06265376_10162 | Not Available | Negative | 68167 - 68640 | 17759.5 |
| type iv secretion-system coupling protein dna-binding domain-containing protein | SAMN06265376_10163 | Not Available | Positive | 68791 - 69999 | 46056.1 |
| hypothetical protein | SAMN06265376_10164 | Not Available | Positive | 70222 - 70398 | 6694.23 |
| site-specific dna recombinase | SAMN06265376_10165 | Not Available | Positive | 70562 - 72319 | 69016.9 |
| helix-turn-helix | SAMN06265376_10166 | Not Available | Positive | 73155 - 73511 | 13681.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

