Paracoccus sediminis strain DSM 26170

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus sediminis strain DSM 26170 is a notable species within the Paracoccus genus, characterized by the presence of flagella, which suggests a degree of motility that may facilitate its adaptation to various environments. This strain has been cataloged with a single replicon, indicating a relatively straightforward genomic structure that could have implications for its genetic stability and inheritance. The genomic information of Paracoccus sediminis is accessible under the accession number FZNM00000000.1, which provides a foundation for further research and understanding of its genetic makeup. The single replicon feature may also suggest a streamlined genome that could be advantageous for survival in specific ecological niches. The presence of flagella in this strain could play a crucial role in its ecological interactions, potentially aiding in nutrient acquisition or colonization of substrates in its environment. As a member of the Paracoccus genus, which is known for its versatility in various habitats, Paracoccus sediminis may contribute to biogeochemical cycles, particularly in sedimentary environments where it can participate in organic matter decomposition and nutrient recycling. This ecological role highlights the importance of studying such microorganisms, as they can have significant impacts on ecosystem functioning and health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus sediminis
Strainstrain DSM 26170

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus sediminis strain DSM 26170 genome assembly, contig:

Gene Summary

Adenine Count

620898 bp

Thymine Count

616861 bp

Guanine Count

1205227 bp

Cytosine Count

1202765 bp

Genome Length

3645751 bp

Protein-coding Genes

3466 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-3-hydroxyaspartate aldolaseSAMN06265378_11324Not AvailablePositive2968375 - 296955342450.5
ornithine cyclodeaminaseSAMN06265378_11325Not AvailablePositive2969553 - 297051533352.8
nucleobase:cation symporter-2, ncs2 familySAMN06265378_11326Not AvailablePositive2970551 - 297202951337.6
cytosine/adenosine deaminaseSAMN06265378_11327Not AvailablePositive2972064 - 297336245582.5
5-hydroxyisourate hydrolaseSAMN06265378_11328Not AvailablePositive2973526 - 297387913140.5
uncharacterized membrane proteinSAMN06265378_11329Not AvailablePositive2973884 - 297514647108.9
dna-binding transcriptional regulator, lysr familySAMN06265378_11330Not AvailableNegative2975168 - 297606133169.1
xanthine dehydrogenase small subunitSAMN06265378_11331Not AvailablePositive2976176 - 297762751654.2
xanthine dehydrogenase, molybdenum binding subunit apoproteinSAMN06265378_11332Not AvailablePositive2977629 - 297993584162.4
molybdenum cofactor sulfurylaseSAMN06265378_11333Not AvailablePositive2979932 - 298067225681.2

Displaying genes 2991 – 3000 of 3605 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.