Paracoccus sediminis strain DSM 26170

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus sediminis strain DSM 26170 is a notable species within the Paracoccus genus, characterized by the presence of flagella, which suggests a degree of motility that may facilitate its adaptation to various environments. This strain has been cataloged with a single replicon, indicating a relatively straightforward genomic structure that could have implications for its genetic stability and inheritance. The genomic information of Paracoccus sediminis is accessible under the accession number FZNM00000000.1, which provides a foundation for further research and understanding of its genetic makeup. The single replicon feature may also suggest a streamlined genome that could be advantageous for survival in specific ecological niches. The presence of flagella in this strain could play a crucial role in its ecological interactions, potentially aiding in nutrient acquisition or colonization of substrates in its environment. As a member of the Paracoccus genus, which is known for its versatility in various habitats, Paracoccus sediminis may contribute to biogeochemical cycles, particularly in sedimentary environments where it can participate in organic matter decomposition and nutrient recycling. This ecological role highlights the importance of studying such microorganisms, as they can have significant impacts on ecosystem functioning and health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus sediminis
Strainstrain DSM 26170

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus sediminis strain DSM 26170 genome assembly, contig:

Gene Summary

Adenine Count

620898 bp

Thymine Count

616861 bp

Guanine Count

1205227 bp

Cytosine Count

1202765 bp

Genome Length

3645751 bp

Protein-coding Genes

3466 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aldehyde dehydrogenase (nad+)SAMN06265378_11279Not AvailableNegative2935389 - 293685251525.5
flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase)SAMN06265378_11280Not AvailableNegative2936857 - 293789439422.1
nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) familySAMN06265378_11281Not AvailableNegative2937891 - 293881432429.2
pimeloyl-acp methyl ester carboxylesteraseSAMN06265378_11282Not AvailableNegative2938801 - 293960128343.0
amino acid synthesisSAMN06265378_11283Not AvailableNegative2939573 - 294017521371.8
dna-binding transcriptional regulator, gntr familySAMN06265378_11284Not AvailablePositive2940255 - 294098327319.7
uncharacterized conserved protein, duf1330 familySAMN06265378_11285Not AvailablePositive2940980 - 294126410118.9
4-carboxymuconolactone decarboxylaseSAMN06265378_11286Not AvailableNegative2941401 - 294179614397.1
gntr family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complexSAMN06265378_11287Not AvailableNegative2942001 - 294269625552.9
amino acid abc transporter substrate-binding protein, paat familySAMN06265378_11288Not AvailablePositive2942824 - 294361828447.7

Displaying genes 2951 – 2960 of 3605 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.