Paracoccus sediminis strain DSM 26170

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus sediminis strain DSM 26170 is a notable species within the Paracoccus genus, characterized by the presence of flagella, which suggests a degree of motility that may facilitate its adaptation to various environments. This strain has been cataloged with a single replicon, indicating a relatively straightforward genomic structure that could have implications for its genetic stability and inheritance. The genomic information of Paracoccus sediminis is accessible under the accession number FZNM00000000.1, which provides a foundation for further research and understanding of its genetic makeup. The single replicon feature may also suggest a streamlined genome that could be advantageous for survival in specific ecological niches. The presence of flagella in this strain could play a crucial role in its ecological interactions, potentially aiding in nutrient acquisition or colonization of substrates in its environment. As a member of the Paracoccus genus, which is known for its versatility in various habitats, Paracoccus sediminis may contribute to biogeochemical cycles, particularly in sedimentary environments where it can participate in organic matter decomposition and nutrient recycling. This ecological role highlights the importance of studying such microorganisms, as they can have significant impacts on ecosystem functioning and health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus sediminis
Strainstrain DSM 26170

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus sediminis strain DSM 26170 genome assembly, contig:

Gene Summary

Adenine Count

620898 bp

Thymine Count

616861 bp

Guanine Count

1205227 bp

Cytosine Count

1202765 bp

Genome Length

3645751 bp

Protein-coding Genes

3466 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isovaleryl-coa dehydrogenaseSAMN06265378_11180Not AvailablePositive2828200 - 282936041690.1
uncharacterized conserved protein yect, duf1311 familySAMN06265378_11181Not AvailablePositive2829360 - 282982116339.3
3-methylcrotonyl-coa carboxylase beta subunitSAMN06265378_11182Not AvailablePositive2829874 - 283152358870.6
3-methylcrotonyl-coa carboxylase alpha subunitSAMN06265378_11183Not AvailablePositive2831617 - 283354867884.2
glutathione s-transferaseSAMN06265378_11184Not AvailablePositive2833541 - 283427226946.3
hydroxymethylglutaryl-coa lyaseSAMN06265378_11185Not AvailablePositive2834265 - 283512829869.8
methylglutaconyl-coa hydrataseSAMN06265378_11186Not AvailablePositive2835121 - 283590327302.0
deoxyuridine 5'-triphosphate nucleotidohydrolaseSAMN06265378_11187Not AvailablePositive2835944 - 283639915591.7
molybdopterin or thiamine biosynthesis adenylyltransferaseSAMN06265378_11188Not AvailablePositive2836404 - 283747136440.9
peptidyl-dipeptidase dcpSAMN06265378_11189Not AvailablePositive2837495 - 283951974196.9

Displaying genes 2851 – 2860 of 3605 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.