Paracoccus sediminis strain DSM 26170

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus sediminis strain DSM 26170 is a notable species within the Paracoccus genus, characterized by the presence of flagella, which suggests a degree of motility that may facilitate its adaptation to various environments. This strain has been cataloged with a single replicon, indicating a relatively straightforward genomic structure that could have implications for its genetic stability and inheritance. The genomic information of Paracoccus sediminis is accessible under the accession number FZNM00000000.1, which provides a foundation for further research and understanding of its genetic makeup. The single replicon feature may also suggest a streamlined genome that could be advantageous for survival in specific ecological niches. The presence of flagella in this strain could play a crucial role in its ecological interactions, potentially aiding in nutrient acquisition or colonization of substrates in its environment. As a member of the Paracoccus genus, which is known for its versatility in various habitats, Paracoccus sediminis may contribute to biogeochemical cycles, particularly in sedimentary environments where it can participate in organic matter decomposition and nutrient recycling. This ecological role highlights the importance of studying such microorganisms, as they can have significant impacts on ecosystem functioning and health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus sediminis
Strainstrain DSM 26170

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus sediminis strain DSM 26170 genome assembly, contig:

Gene Summary

Adenine Count

620898 bp

Thymine Count

616861 bp

Guanine Count

1205227 bp

Cytosine Count

1202765 bp

Genome Length

3645751 bp

Protein-coding Genes

3466 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diaminopimelate decarboxylaseSAMN06265378_103156Not AvailableNegative1225592 - 122685744721.5
hypothetical proteinSAMN06265378_103157Not AvailableNegative1226858 - 12270074968.07
argininosuccinate lyaseSAMN06265378_103158Not AvailableNegative1227004 - 122840750900.4
thiol-disulfide isomerase or thioredoxinSAMN06265378_103159Not AvailablePositive1228431 - 122897919831.9
dna-3-methyladenine glycosylase iSAMN06265378_103160Not AvailableNegative1228954 - 122953521569.7
eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant)SAMN06265378_103161Not AvailablePositive1229634 - 123045230149.2
acetyl-coa acetyltransferaseSAMN06265378_103162Not AvailablePositive1230554 - 123172640739.6
3-oxoacyl-[acyl-carrier-protein] reductase /acetoacetyl-coa reductaseSAMN06265378_103163Not AvailablePositive1231812 - 123253725482.4
hypothetical proteinSAMN06265378_103164Not AvailableNegative1232610 - 12327746254.56
trna1(val) a37 n6-methylase trmn6SAMN06265378_103165Not AvailableNegative1232835 - 123363527874.8

Displaying genes 1301 – 1310 of 3605 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.