Polynucleobacter sp. MWH-VicM1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Polynucleobacter

Description

Polynucleobacter sp. MWH-VicM1 is a rod-shaped bacterium characterized by a single replicon, which indicates a streamlined genomic structure potentially advantageous for its adaptability in various environments. The organism's genetic information is accessible under the accession number FYEX00000000.1, providing a valuable resource for further research and analysis. The rod shape of Polynucleobacter sp. MWH-VicM1 may confer certain advantages in nutrient uptake and motility within its aquatic habitats. This morphology is commonly associated with a range of ecological roles, including those that involve biofilm formation and interactions with other microorganisms. In ecological contexts, Polynucleobacter species are often found in freshwater environments, where they play critical roles in nutrient cycling and microbial community dynamics. The presence of a single replicon in Polynucleobacter sp. MWH-VicM1 suggests a potential for rapid adaptation and efficient resource utilization, which may be crucial for survival in fluctuating conditions typical of freshwater ecosystems. Overall, the traits of Polynucleobacter sp. MWH-VicM1 indicate its potential significance in microbial ecology, particularly in freshwater habitats, where its rod shape and genetic configuration could influence its interactions within the microbial community and its role in biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPolynucleobacter
SpeciesPolynucleobacter victoriensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatLake Victoria
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polynucleobacter sp. MWH-VicM1 genome assembly, contig:

Gene Summary

Adenine Count

469149 bp

Thymine Count

456441 bp

Guanine Count

333422 bp

Cytosine Count

367624 bp

Genome Length

1626636 bp

Protein-coding Genes

1631 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fatty-acyl-coa synthaseSAMN06295916_0393Not AvailableNegative365947 - 36759960041.4
acetoin utilization deacetylase acucSAMN06295916_0394Not AvailableNegative367754 - 36867733980.3
membrane-bound lytic murein transglycosylase bSAMN06295916_0395Not AvailablePositive368755 - 36997244583.6
cysteine synthase bSAMN06295916_0396Not AvailableNegative369969 - 37088633109.8
competence protein comeaSAMN06295916_0397Not AvailableNegative370957 - 37140616251.7
adp-l-glycero-d-manno-heptose 6-epimeraseSAMN06295916_0398Not AvailableNegative371497 - 37251638297.1
rfae bifunctional protein, domain iSAMN06295916_0399Not AvailableNegative372513 - 37345433775.7
lipopolysaccharide biosynthesis regulator ycim, contains six tpr domains and a predicted metal-binding c-terminal domainSAMN06295916_0400Not AvailableNegative373502 - 37471645699.7
protein of unknown functionSAMN06295916_0401Not AvailableNegative374719 - 3749679212.95
integration host factor subunit betaSAMN06295916_0402Not AvailableNegative374964 - 37529912705.4

Displaying genes 391 – 400 of 1670 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.