Polynucleobacter sp. MWH-VicM1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Polynucleobacter

Description

Polynucleobacter sp. MWH-VicM1 is a rod-shaped bacterium characterized by a single replicon, which indicates a streamlined genomic structure potentially advantageous for its adaptability in various environments. The organism's genetic information is accessible under the accession number FYEX00000000.1, providing a valuable resource for further research and analysis. The rod shape of Polynucleobacter sp. MWH-VicM1 may confer certain advantages in nutrient uptake and motility within its aquatic habitats. This morphology is commonly associated with a range of ecological roles, including those that involve biofilm formation and interactions with other microorganisms. In ecological contexts, Polynucleobacter species are often found in freshwater environments, where they play critical roles in nutrient cycling and microbial community dynamics. The presence of a single replicon in Polynucleobacter sp. MWH-VicM1 suggests a potential for rapid adaptation and efficient resource utilization, which may be crucial for survival in fluctuating conditions typical of freshwater ecosystems. Overall, the traits of Polynucleobacter sp. MWH-VicM1 indicate its potential significance in microbial ecology, particularly in freshwater habitats, where its rod shape and genetic configuration could influence its interactions within the microbial community and its role in biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPolynucleobacter
SpeciesPolynucleobacter victoriensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatLake Victoria
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polynucleobacter sp. MWH-VicM1 genome assembly, contig:

Gene Summary

Adenine Count

469149 bp

Thymine Count

456441 bp

Guanine Count

333422 bp

Cytosine Count

367624 bp

Genome Length

1626636 bp

Protein-coding Genes

1631 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
regulatory inactivation of dnaa hda proteinSAMN06295916_1205Not AvailableNegative1155838 - 115659628170.0
predicted purr-regulated permease permSAMN06295916_1206Not AvailableNegative1156599 - 115759436301.8
phosphoribosylformylglycinamidine cyclo-ligaseSAMN06295916_1207Not AvailablePositive1157653 - 115870536898.6
trna dimethylallyltransferaseSAMN06295916_1208Not AvailableNegative1158711 - 115968236140.6
dna mismatch repair protein mutlSAMN06295916_1209Not AvailableNegative1159689 - 116145264554.1
regulator of sirc expression, contains transglutaminase-like and tpr domainsSAMN06295916_1210Not AvailableNegative1161464 - 116230632301.8
putative peptidoglycan lipid ii flippaseSAMN06295916_1211Not AvailableNegative1162321 - 116387756181.4
small subunit ribosomal protein s20SAMN06295916_1212Not AvailablePositive1163973 - 11642399398.36
protein of unknown functionSAMN06295916_1213Not AvailableNegative1164294 - 116460211615.9
ornithine carbamoyltransferaseSAMN06295916_1214Not AvailablePositive1164713 - 116563934818.4

Displaying genes 1201 – 1210 of 1670 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.