Loktanella marina strain CECT 8899

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Flavimaricola

Description

Loktanella marina strain CECT 8899 is characterized by having a single replicon, which indicates a streamlined genomic organization that may facilitate efficient replication and stability within its environment. The strain is cataloged under the accession number FXZK00000000.1, providing a reference point for further genetic and genomic studies. The presence of only one replicon suggests that Loktanella marina strain CECT 8899 may have adaptations that allow it to thrive in specific ecological niches, potentially enhancing its resilience in marine environments. Such a genomic structure can imply a simplified regulatory mechanism, which might contribute to its survival and metabolic efficiency in the ocean. Understanding the genomic organization of Loktanella marina strain CECT 8899 can provide insights into the evolutionary strategies that marine bacteria employ. As marine microorganisms play crucial roles in biogeochemical cycles and ecosystem dynamics, studying strains like CECT 8899 may reveal important information about microbial diversity and functionality in marine systems. This knowledge could further inform ecological models and conservation strategies aimed at preserving marine biodiversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusFlavimaricola
SpeciesFlavimaricola marinus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Loktanella marina strain CECT 8899 genome assembly, contig: 0056,

Gene Summary

Adenine Count

907828 bp

Thymine Count

902126 bp

Guanine Count

1486428 bp

Cytosine Count

1496189 bp

Genome Length

4792571 bp

Protein-coding Genes

4540 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ecf rna polymerase sigma factor sigjLOM8899_04333Not AvailableNegative4509128 - 451000332841.4
hypothetical proteinLOM8899_04334Not AvailableNegative4510000 - 451054219316.4
hypothetical proteinLOM8899_04335Not AvailableNegative4510539 - 451092513669.0
nadh oxidaseLOM8899_04336Not AvailableNegative4511175 - 451238042717.2
helix-turn-helix domain proteinLOM8899_04337Not AvailableNegative4512461 - 451276911855.3
hypothetical proteinLOM8899_04338Not AvailablePositive4513379 - 451457243836.7
naphthalene 1,2-dioxygenase system ferredoxin subunitLOM8899_04339Not AvailablePositive4514925 - 451523611653.6
3-methyl-2-oxobutanoate hydroxymethyltransferaseLOM8899_04340Not AvailablePositive4515248 - 451603929124.8
l-idonate 5-dehydrogenase (nad(p)(+))LOM8899_04341Not AvailableNegative4516145 - 451717636387.1
glyoxylate/hydroxypyruvate reductase bLOM8899_04342Not AvailableNegative4517178 - 451812534352.0

Displaying genes 4321 – 4330 of 4597 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.