Loktanella marina strain CECT 8899

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Flavimaricola

Description

Loktanella marina strain CECT 8899 is characterized by having a single replicon, which indicates a streamlined genomic organization that may facilitate efficient replication and stability within its environment. The strain is cataloged under the accession number FXZK00000000.1, providing a reference point for further genetic and genomic studies. The presence of only one replicon suggests that Loktanella marina strain CECT 8899 may have adaptations that allow it to thrive in specific ecological niches, potentially enhancing its resilience in marine environments. Such a genomic structure can imply a simplified regulatory mechanism, which might contribute to its survival and metabolic efficiency in the ocean. Understanding the genomic organization of Loktanella marina strain CECT 8899 can provide insights into the evolutionary strategies that marine bacteria employ. As marine microorganisms play crucial roles in biogeochemical cycles and ecosystem dynamics, studying strains like CECT 8899 may reveal important information about microbial diversity and functionality in marine systems. This knowledge could further inform ecological models and conservation strategies aimed at preserving marine biodiversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusFlavimaricola
SpeciesFlavimaricola marinus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Loktanella marina strain CECT 8899 genome assembly, contig: 0056,

Gene Summary

Adenine Count

907828 bp

Thymine Count

902126 bp

Guanine Count

1486428 bp

Cytosine Count

1496189 bp

Genome Length

4792571 bp

Protein-coding Genes

4540 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
smp-30/gluconolaconase/lre-like regionLOM8899_03921Not AvailableNegative4059975 - 406080229092.5
3-oxoadipate coa-transferase subunit bLOM8899_03922Not AvailableNegative4060815 - 406257863175.0
hypothetical proteinLOM8899_03923Not AvailableNegative4062575 - 406362437143.7
succinyl-coa:(r)-benzylsuccinate coa-transferase subunit bbsfLOM8899_03924Not AvailableNegative4063630 - 406485644803.8
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenaseLOM8899_03925Not AvailableNegative4064876 - 406567627937.6
ribose transport system permease protein rbscLOM8899_03926Not AvailableNegative4065681 - 406667334448.4
ribose import atp-binding protein rbsaLOM8899_03927Not AvailableNegative4066657 - 406818355249.7
ribose transport system permease protein rbscLOM8899_03928Not AvailableNegative4068176 - 406915633959.6
d-ribose-binding periplasmic protein precursorLOM8899_03929Not AvailableNegative4069246 - 407026836012.6
bacterial extracellular solute-binding proteinLOM8899_03930Not AvailableNegative4070317 - 407146541676.1

Displaying genes 3931 – 3940 of 4597 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.