Loktanella marina strain CECT 8899

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Flavimaricola

Description

Loktanella marina strain CECT 8899 is characterized by having a single replicon, which indicates a streamlined genomic organization that may facilitate efficient replication and stability within its environment. The strain is cataloged under the accession number FXZK00000000.1, providing a reference point for further genetic and genomic studies. The presence of only one replicon suggests that Loktanella marina strain CECT 8899 may have adaptations that allow it to thrive in specific ecological niches, potentially enhancing its resilience in marine environments. Such a genomic structure can imply a simplified regulatory mechanism, which might contribute to its survival and metabolic efficiency in the ocean. Understanding the genomic organization of Loktanella marina strain CECT 8899 can provide insights into the evolutionary strategies that marine bacteria employ. As marine microorganisms play crucial roles in biogeochemical cycles and ecosystem dynamics, studying strains like CECT 8899 may reveal important information about microbial diversity and functionality in marine systems. This knowledge could further inform ecological models and conservation strategies aimed at preserving marine biodiversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusFlavimaricola
SpeciesFlavimaricola marinus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Loktanella marina strain CECT 8899 genome assembly, contig: 0056,

Gene Summary

Adenine Count

907828 bp

Thymine Count

902126 bp

Guanine Count

1486428 bp

Cytosine Count

1496189 bp

Genome Length

4792571 bp

Protein-coding Genes

4540 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative efflux pump outer membrane protein ttgc precursorLOM8899_03470Not AvailablePositive3576253 - 357768350741.0
pkd domain proteinLOM8899_03471Not AvailablePositive3578341 - 358079786806.7
udp-n-acetyl-d-glucosamine 6-dehydrogenaseLOM8899_03472Not AvailableNegative3581115 - 358244047685.6
hypothetical proteinLOM8899_03473Not AvailableNegative3582565 - 358305617399.0
oligosaccharide biosynthesis protein alg14 like proteinLOM8899_03474Not AvailableNegative3583053 - 358352917321.2
peptidoglycan-n-acetylglucosamine deacetylaseLOM8899_03475Not AvailableNegative3583522 - 358423526246.7
hypothetical proteinLOM8899_03476Not AvailableNegative3584232 - 35844628044.82
dtdp-4-amino-4,6-dideoxy-d-glucose transaminaseLOM8899_03477Not AvailablePositive3584478 - 358565041674.4
arabinose 5-phosphate isomerase kdsdLOM8899_03478Not AvailablePositive3585868 - 358684533498.9
3-deoxy-manno-octulosonate cytidylyltransferaseLOM8899_03479Not AvailablePositive3586874 - 358766528808.0

Displaying genes 3481 – 3490 of 4597 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.