Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional activator hlyu | PEV8663_00905 | Not Available | Negative | 896991 - 897269 | 10053.0 |
| rna polymerase sigma factor rpod | PEV8663_00906 | Not Available | Negative | 897279 - 899270 | 75478.6 |
| dna primase | PEV8663_00907 | Not Available | Negative | 899388 - 901367 | 72887.9 |
| hypothetical protein | PEV8663_00908 | Not Available | Negative | 901523 - 901804 | 10202.5 |
| sarcosine oxidase, gamma subunit family | PEV8663_00909 | Not Available | Negative | 901837 - 902379 | 19178.2 |
| aminomethyltransferase | PEV8663_00910 | Not Available | Negative | 902372 - 905296 | 105023.0 |
| sarcosine oxidase, delta subunit family | PEV8663_00911 | Not Available | Negative | 905286 - 905552 | 9875.48 |
| hypothetical protein | PEV8663_00912 | Not Available | Negative | 905560 - 906066 | 18167.7 |
| sarcosine oxidase subunit beta | PEV8663_00913 | Not Available | Negative | 906080 - 907333 | 45461.3 |
| hypothetical protein | PEV8663_00914 | Not Available | Negative | 907438 - 907995 | 21235.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
