Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acetyltransferase | PEV8663_00855 | Not Available | Negative | 852211 - 852708 | 17776.9 |
| hypothetical protein | PEV8663_00856 | Not Available | Negative | 852705 - 854120 | 51814.2 |
| enterobactin exporter ents | PEV8663_00857 | Not Available | Positive | 854322 - 855575 | 44146.2 |
| hypothetical protein | PEV8663_00858 | Not Available | Positive | 855648 - 856079 | 16172.7 |
| trna pseudouridine synthase a | PEV8663_00859 | Not Available | Positive | 856131 - 856913 | 29195.1 |
| succinylornithine transaminase/acetylornithine aminotransferase | PEV8663_00860 | Not Available | Positive | 857203 - 858384 | 41297.7 |
| ornithine carbamoyltransferase | PEV8663_00861 | Not Available | Positive | 858463 - 859389 | 34477.6 |
| atp-dependent rna helicase hrpb | PEV8663_00862 | Not Available | Negative | 859454 - 861952 | 90410.0 |
| putative gtpase/mt1543 | PEV8663_00863 | Not Available | Positive | 862016 - 862999 | 35497.0 |
| 50s ribosomal protein l28 | PEV8663_00864 | Not Available | Positive | 863190 - 863489 | 10793.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
