Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase ydgj | PEV8663_00765 | Not Available | Positive | 757101 - 758108 | 36967.8 |
| putative oxidoreductase ycjs | PEV8663_00766 | Not Available | Positive | 758101 - 759159 | 37753.6 |
| hypothetical protein | PEV8663_00767 | Not Available | Negative | 759224 - 759433 | 6920.3 |
| hypothetical protein | PEV8663_00768 | Not Available | Negative | 759525 - 760343 | 29014.9 |
| high-affinity branched-chain amino acid transport atp-binding protein livf | PEV8663_00769 | Not Available | Negative | 760496 - 761194 | 25414.7 |
| l-cystine import atp-binding protein tcyn | PEV8663_00770 | Not Available | Negative | 761197 - 761937 | 27018.8 |
| leucine/isoleucine/valine transporter permease subunit | PEV8663_00771 | Not Available | Negative | 761934 - 763097 | 41634.4 |
| high-affinity branched-chain amino acid transport system permease protein livh | PEV8663_00772 | Not Available | Negative | 763239 - 765164 | 68405.4 |
| aliphatic amidase expression-regulating protein | PEV8663_00773 | Not Available | Negative | 765232 - 766515 | 46101.2 |
| urease accessory protein ured | PEV8663_00774 | Not Available | Positive | 767036 - 767731 | 24599.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
