Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autoinducer-2 (ai-2) modifying protein lsrg | PEV8663_00734 | Not Available | Positive | 724174 - 724455 | 10935.3 |
| n-acyl homoserine lactonase | PEV8663_00735 | Not Available | Positive | 724452 - 725273 | 30303.2 |
| recombination protein recr | PEV8663_00736 | Not Available | Negative | 725447 - 726043 | 21301.8 |
| trab family protein | PEV8663_00737 | Not Available | Negative | 726043 - 727104 | 38186.6 |
| nucleoid-associated protein | PEV8663_00738 | Not Available | Negative | 727104 - 727448 | 12274.0 |
| dna polymerase iii subunit tau | PEV8663_00739 | Not Available | Negative | 727603 - 729363 | 62990.3 |
| ankyrin repeats (3 copies) | PEV8663_00740 | Not Available | Positive | 729589 - 731115 | 55126.1 |
| putative neutral zinc metallopeptidase | PEV8663_00741 | Not Available | Positive | 731214 - 732050 | 29896.2 |
| hypothetical protein | PEV8663_00742 | Not Available | Positive | 732001 - 732564 | 19499.2 |
| ribosomal rna large subunit methyltransferase l | PEV8663_00744 | Not Available | Positive | 732878 - 733984 | 39907.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
