Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 27 kda antigen cfp30b | PEV8663_00714 | Not Available | Negative | 704788 - 705183 | 14096.8 |
| (s)-2-haloacid dehalogenase 4a | Not Available | Not Available | Positive | 705323 - 706000 | 24672.5 |
| haloacetate dehalogenase h-1 | PEV8663_00716 | Not Available | Positive | 706000 - 706818 | 29894.9 |
| trna pseudouridine synthase b | PEV8663_00717 | Not Available | Negative | 706874 - 707800 | 33490.8 |
| dna-binding transcriptional activator tdca | PEV8663_00718 | Not Available | Negative | 707901 - 708725 | 29946.9 |
| methionine--trna ligase | PEV8663_00719 | Not Available | Negative | 708971 - 710683 | 64395.6 |
| putative mfs-type transporter ycad | PEV8663_00720 | Not Available | Negative | 710738 - 711982 | 44069.3 |
| thioesterase superfamily protein | PEV8663_00721 | Not Available | Positive | 712138 - 712623 | 16944.5 |
| hypothetical protein | PEV8663_00722 | Not Available | Negative | 712669 - 713262 | 21623.5 |
| general stress protein 69 | PEV8663_00723 | Not Available | Positive | 713378 - 714427 | 38184.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
