Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional protein puta | PEV8663_00549 | Not Available | Negative | 557876 - 561292 | 121812.0 |
| leucine-responsive regulatory protein | PEV8663_00550 | Not Available | Positive | 561434 - 561910 | 17392.0 |
| tetratricopeptide repeat protein | PEV8663_00551 | Not Available | Positive | 561941 - 562483 | 20290.2 |
| Trna-leu | Not Available | Not Available | Positive | 562535 - 562621 | Not Available |
| hypothetical protein | PEV8663_00598 | Not Available | Negative | 596786 - 597103 | 12000.7 |
| sialic acid trap transporter permease protein siat | PEV8663_00599 | Not Available | Negative | 597116 - 598927 | 63610.1 |
| 2,3-diketo-l-gulonate trap transporter small permease protein yiam | PEV8663_00600 | Not Available | Negative | 598931 - 599614 | 25323.1 |
| c4-dicarboxylate-binding periplasmic protein precursor | PEV8663_00601 | Not Available | Negative | 599685 - 600686 | 36805.5 |
| fluoroacetate dehalogenase | PEV8663_00602 | Not Available | Positive | 600867 - 601772 | 33371.4 |
| 3-isopropylmalate dehydratase large subunit 1 | PEV8663_00603 | Not Available | Positive | 601769 - 603163 | 49284.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
