Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate synthase thyx | PEV8663_00529 | Not Available | Positive | 537921 - 538826 | 34674.2 |
| putative nucleotide-binding protein containing tir-like domain protein | PEV8663_00530 | Not Available | Positive | 538833 - 539726 | 33187.0 |
| hypothetical protein | PEV8663_00531 | Not Available | Positive | 539883 - 540221 | 12069.4 |
| dna topoisomerase 4 subunit b | PEV8663_00532 | Not Available | Positive | 540325 - 542283 | 71747.5 |
| hypothetical protein | PEV8663_00533 | Not Available | Positive | 542324 - 543034 | 26593.9 |
| cytochrome c | PEV8663_00534 | Not Available | Negative | 543047 - 543454 | 14551.7 |
| poly(beta-d-mannuronate) c5 epimerase 2 | PEV8663_00535 | Not Available | Positive | 544067 - 549643 | 184837.0 |
| hypothetical protein | PEV8663_00536 | Not Available | Positive | 549804 - 550127 | 11682.1 |
| membrane-bound lytic murein transglycosylase b precursor | PEV8663_00537 | Not Available | Negative | 550124 - 551365 | 43910.2 |
| hypothetical protein | PEV8663_00538 | Not Available | Negative | 551476 - 551736 | 10130.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
