Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator cynr | PEV8663_00469 | Not Available | Positive | 476985 - 477947 | 35009.5 |
| 4-methylaminobutanoate oxidase (formaldehyde-forming) | PEV8663_00470 | Not Available | Positive | 478104 - 480539 | 89175.9 |
| trimethylamine methyltransferase (mttb) | PEV8663_00471 | Not Available | Positive | 480612 - 482165 | 55587.9 |
| transglutaminase-like superfamily protein | PEV8663_00472 | Not Available | Negative | 482205 - 483002 | 28762.1 |
| hypothetical protein | PEV8663_00473 | Not Available | Negative | 483011 - 483952 | 35246.0 |
| hypothetical protein | PEV8663_00474 | Not Available | Negative | 483956 - 485383 | 53011.5 |
| hypothetical protein | PEV8663_00475 | Not Available | Positive | 485694 - 489017 | 122708.0 |
| hypothetical protein | PEV8663_00476 | Not Available | Positive | 489022 - 491445 | 88726.1 |
| transglutaminase-like superfamily protein | PEV8663_00477 | Not Available | Positive | 491449 - 492324 | 31788.5 |
| proteasome subunit alpha | PEV8663_00478 | Not Available | Negative | 492346 - 493080 | 26692.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
