Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type biogenesis protein ccmh precursor | PEV8663_00409 | Not Available | Negative | 408072 - 408539 | 16931.5 |
| cytochrome c-type biogenesis protein ccmf | PEV8663_00410 | Not Available | Negative | 408536 - 410503 | 71522.5 |
| hypothetical protein | PEV8663_00411 | Not Available | Negative | 410592 - 411143 | 19970.1 |
| putative peptidoglycan domain protein | PEV8663_00412 | Not Available | Negative | 411134 - 411757 | 22908.3 |
| hypothetical protein | PEV8663_00413 | Not Available | Positive | 411841 - 412263 | 15350.1 |
| glucose-6-phosphate isomerase | PEV8663_00414 | Not Available | Negative | 412342 - 413922 | 57159.1 |
| 6-phosphogluconolactonase | PEV8663_00415 | Not Available | Negative | 413927 - 414622 | 25135.2 |
| glucose-6-phosphate 1-dehydrogenase | PEV8663_00416 | Not Available | Negative | 414601 - 416055 | 54249.7 |
| antilisterial bacteriocin subtilosin biosynthesis protein alba | PEV8663_00417 | Not Available | Positive | 416237 - 417184 | 34710.5 |
| pyrimidine-specific ribonucleoside hydrolase riha | PEV8663_00418 | Not Available | Positive | 417561 - 418511 | 33938.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
