Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indole-3-glycerol phosphate synthase | PEV8663_00399 | Not Available | Positive | 397293 - 398096 | 28664.3 |
| cyclic pyranopterin monophosphate synthase accessory protein | PEV8663_00400 | Not Available | Positive | 398107 - 398583 | 16701.3 |
| hypothetical protein | PEV8663_00401 | Not Available | Positive | 398580 - 399476 | 33332.6 |
| molybdopterin molybdenumtransferase | PEV8663_00402 | Not Available | Positive | 399473 - 400636 | 40638.3 |
| lexa repressor | PEV8663_00403 | Not Available | Positive | 400715 - 401410 | 24855.3 |
| comec family competence protein | PEV8663_00404 | Not Available | Negative | 401404 - 403476 | 73159.2 |
| glutamate--trna ligase | PEV8663_00405 | Not Available | Positive | 403585 - 404994 | 51608.1 |
| citrate synthase | PEV8663_00406 | Not Available | Positive | 405086 - 406381 | 47842.0 |
| 1,2-epoxyphenylacetyl-coa isomerase | PEV8663_00407 | Not Available | Negative | 406529 - 407305 | 28012.5 |
| hypothetical protein | PEV8663_00408 | Not Available | Negative | 407375 - 407887 | 19348.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
