Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional repressor arsr | PEV8663_00368 | Not Available | Negative | 371294 - 371635 | 12426.1 |
| l-2,4-diaminobutyrate decarboxylase | PEV8663_00369 | Not Available | Positive | 371669 - 373036 | 47910.9 |
| putative beta-lactamase hcpc precursor | PEV8663_00370 | Not Available | Negative | 373047 - 373958 | 33250.1 |
| cytochrome c' precursor | PEV8663_00371 | Not Available | Positive | 374107 - 374556 | 15270.3 |
| fructose dehydrogenase cytochrome subunit precursor | PEV8663_00372 | Not Available | Positive | 374560 - 375444 | 31596.2 |
| lipoyl synthase | PEV8663_00373 | Not Available | Negative | 375522 - 376472 | 35206.0 |
| putative peroxiredoxin | PEV8663_00374 | Not Available | Positive | 376747 - 377292 | 20069.5 |
| hypothetical protein | PEV8663_00375 | Not Available | Negative | 377363 - 378493 | 40864.7 |
| hypothetical protein | PEV8663_00376 | Not Available | Positive | 378727 - 379014 | 10714.2 |
| trimethylamine methyltransferase (mttb) | PEV8663_00377 | Not Available | Negative | 379132 - 380673 | 55552.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
