Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bestrophin, rfp-tm, chloride channel | PEV8663_04721 | Not Available | Positive | 4813415 - 4814320 | 33674.5 |
| major facilitator superfamily protein | PEV8663_04722 | Not Available | Positive | 4814710 - 4816032 | 47080.4 |
| hypothetical protein | PEV8663_04723 | Not Available | Positive | 4816196 - 4816381 | 6697.12 |
| integrase core domain protein | PEV8663_04724 | Not Available | Positive | 4816657 - 4816992 | 12108.2 |
| glucans biosynthesis protein | PEV8663_04725 | Not Available | Negative | 4817076 - 4818140 | 39055.4 |
| hypothetical protein | PEV8663_04726 | Not Available | Negative | 4818134 - 4818331 | 7363.99 |
| initiator replication protein | PEV8663_04727 | Not Available | Negative | 4818381 - 4819325 | 34989.9 |
| hth-type transcriptional regulator cynr | PEV8663_04728 | Not Available | Negative | 4819486 - 4820361 | 32381.1 |
| sn-glycerol-3-phosphate-binding periplasmic protein ugpb precursor | PEV8663_04729 | Not Available | Positive | 4820580 - 4821890 | 46639.1 |
| sn-glycerol-3-phosphate transport system permease protein ugpa | PEV8663_04730 | Not Available | Positive | 4821952 - 4822833 | 32653.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
