Pelagimonas varians strain CECT 8663

rodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pelagimonas

Description

Pelagimonas varians strain CECT 8663 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain exhibits mesophilic growth, with an optimal temperature for proliferation identified at 29°C. The genomic structure of Pelagimonas varians strain CECT 8663 is notable for having a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and survival in specific ecological niches. The strain is cataloged under the accession number FXYH00000000.1, which serves as a reference for its genomic data. Understanding the traits of Pelagimonas varians strain CECT 8663 can offer insights into its ecological role, particularly in marine environments where similar aerobic, mesophilic bacteria are often integral to nutrient cycling and organic matter degradation. The reliance on aerobic conditions suggests that this strain may play a significant role in the decomposition of organic materials in oxygen-rich aquatic ecosystems, contributing to the overall health and function of these environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPelagimonas
SpeciesPelagimonas varians
Strainstrain CECT 8663

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
Habitatgut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pelagimonas varians strain CECT 8663 genome assembly, contig:

Gene Summary

Adenine Count

1099218 bp

Thymine Count

1095060 bp

Guanine Count

1341998 bp

Cytosine Count

1360831 bp

Genome Length

4897107 bp

Protein-coding Genes

4651 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dtdp-glucose 4,6-dehydratase 2PEV8663_04591Not AvailablePositive4683182 - 468422838031.8
transposon gamma-delta resolvasePEV8663_04592Not AvailablePositive4684455 - 468499720224.6
dtdp-4-dehydrorhamnose reductasePEV8663_04593Not AvailablePositive4685107 - 468594629428.1
glucose-1-phosphate thymidylyltransferase 1PEV8663_04594Not AvailablePositive4685943 - 468681531649.8
dtdp-glucose 4,6-dehydratasePEV8663_04595Not AvailablePositive4686923 - 468793637796.1
hypothetical proteinPEV8663_04596Not AvailablePositive4688108 - 468882127322.3
pgl/p-hbad biosynthesis glycosyltransferase/mt3031PEV8663_04597Not AvailableNegative4688908 - 468965127446.8
hypothetical proteinPEV8663_04598Not AvailableNegative4689772 - 469051828403.8
d-inositol 3-phosphate glycosyltransferasePEV8663_04599Not AvailableNegative4690515 - 469154938447.1
sulfotransferase domain proteinPEV8663_04600Not AvailableNegative4691546 - 469248734488.2

Displaying genes 4591 – 4600 of 4793 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.