Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain protein | PEV8663_04450 | Not Available | Negative | 4538153 - 4538908 | 29015.1 |
| hypothetical protein | PEV8663_04451 | Not Available | Negative | 4538905 - 4539030 | 4779.87 |
| hypothetical protein | PEV8663_04452 | Not Available | Negative | 4539030 - 4539221 | 6802.21 |
| Trna-met | Not Available | Not Available | Positive | 4539502 - 4539578 | Not Available |
| hypothetical protein | PEV8663_04454 | Not Available | Positive | 4540238 - 4540810 | 20030.6 |
| hemolysin secretion protein d, chromosomal | PEV8663_04455 | Not Available | Negative | 4541020 - 4542321 | 47631.3 |
| toxin rtx-i translocation atp-binding protein | PEV8663_04456 | Not Available | Negative | 4542314 - 4544254 | 67886.6 |
| toxin rtx-i translocation atp-binding protein | PEV8663_04457 | Not Available | Negative | 4544251 - 4545780 | 53549.7 |
| transposase is116/is110/is902 family protein | PEV8663_04458 | Not Available | Negative | 4547033 - 4547857 | 30419.2 |
| hypothetical protein | PEV8663_04459 | Not Available | Positive | 4548421 - 4549185 | 28287.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
