Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase | PEV8663_04400 | Not Available | Negative | 4488636 - 4489520 | 32485.6 |
| n-acetylglucosamine repressor | PEV8663_04401 | Not Available | Negative | 4489612 - 4490820 | 43941.6 |
| d-ribose-binding periplasmic protein precursor | PEV8663_04402 | Not Available | Positive | 4490982 - 4492001 | 34539.5 |
| ribose transport system permease protein rbsc | PEV8663_04403 | Not Available | Positive | 4492121 - 4493206 | 37812.8 |
| ribose import atp-binding protein rbsa | PEV8663_04404 | Not Available | Positive | 4493203 - 4493997 | 28737.1 |
| hypothetical protein | PEV8663_04405 | Not Available | Positive | 4494388 - 4494840 | 16468.8 |
| hypothetical protein | PEV8663_04406 | Not Available | Positive | 4494837 - 4495052 | 7580.13 |
| Trna-leu | Not Available | Not Available | Positive | 4495717 - 4495803 | Not Available |
| hypothetical protein | PEV8663_04408 | Not Available | Positive | 4495952 - 4496932 | 35263.4 |
| hypothetical protein | PEV8663_04409 | Not Available | Negative | 4497012 - 4497275 | 9692.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
