Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PEV8663_04350 | Not Available | Negative | 4418106 - 4418318 | 8212.79 |
| integrase core domain protein | PEV8663_04351 | Not Available | Negative | 4418367 - 4418849 | 18622.8 |
| hypothetical protein | PEV8663_04352 | Not Available | Positive | 4419185 - 4419373 | 6908.38 |
| hypothetical protein | PEV8663_04353 | Not Available | Negative | 4419975 - 4420100 | 4833.82 |
| hypothetical protein | PEV8663_04354 | Not Available | Negative | 4420153 - 4420290 | 5332.7 |
| flavin-dependent tryptophan halogenase rebh | PEV8663_04355 | Not Available | Negative | 4420465 - 4421970 | 56462.5 |
| hypothetical protein | PEV8663_04356 | Not Available | Negative | 4422034 - 4428240 | 210788.0 |
| hypothetical protein | PEV8663_04357 | Not Available | Positive | 4428388 - 4435002 | 225497.0 |
| release factor glutamine methyltransferase | PEV8663_04358 | Not Available | Positive | 4435221 - 4436585 | 49306.0 |
| secreted effector protein pipb2 | PEV8663_04359 | Not Available | Positive | 4437516 - 4438202 | 25186.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
