Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino-acid carrier protein alst | PEV8663_04300 | Not Available | Positive | 4366631 - 4368184 | 54404.8 |
| ribosomal rna large subunit methyltransferase f | PEV8663_04301 | Not Available | Positive | 4369098 - 4370024 | 34833.9 |
| hypothetical protein | PEV8663_04302 | Not Available | Positive | 4370851 - 4371507 | 24969.9 |
| hypothetical protein | PEV8663_04303 | Not Available | Positive | 4371657 - 4371788 | 4622.58 |
| bicarbonate transport system permease protein cmpb | PEV8663_04304 | Not Available | Negative | 4372064 - 4372822 | 27820.8 |
| bicarbonate transport atp-binding protein cmpd | PEV8663_04305 | Not Available | Negative | 4372819 - 4373613 | 29084.7 |
| nmt1/thi5 like protein | PEV8663_04306 | Not Available | Negative | 4373671 - 4374678 | 35296.1 |
| hypothetical protein | PEV8663_04307 | Not Available | Positive | 4375146 - 4375787 | 23474.2 |
| hypothetical protein | PEV8663_04308 | Not Available | Positive | 4375793 - 4376773 | 34975.3 |
| oligopeptide transport atp-binding protein oppf | PEV8663_04309 | Not Available | Negative | 4376885 - 4377625 | 27019.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
