Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit 3 | PEV8663_04250 | Not Available | Negative | 4312166 - 4312972 | 30441.2 |
| cytochrome c oxidase assembly protein ctag | PEV8663_04251 | Not Available | Negative | 4312992 - 4313576 | 21500.4 |
| hypothetical protein | PEV8663_04252 | Not Available | Negative | 4313566 - 4313733 | 5946.32 |
| protoheme ix farnesyltransferase | PEV8663_04253 | Not Available | Negative | 4313730 - 4314665 | 33953.9 |
| cytochrome c oxidase subunit 2 precursor | PEV8663_04254 | Not Available | Negative | 4314784 - 4315662 | 31709.3 |
| protease tldd | PEV8663_04255 | Not Available | Positive | 4315844 - 4317265 | 49495.7 |
| hypothetical protein | PEV8663_04256 | Not Available | Positive | 4317505 - 4318722 | 43005.8 |
| hypothetical protein | PEV8663_04257 | Not Available | Negative | 4318725 - 4319168 | 16565.8 |
| dna topoisomerase 1 | PEV8663_04258 | Not Available | Positive | 4319334 - 4322042 | 99560.5 |
| putative succinyl-coa:3-ketoacid coenzyme a transferase subunit a | PEV8663_04259 | Not Available | Positive | 4322558 - 4323262 | 25310.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
