Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase catalytic domain | PEV8663_04220 | Not Available | Positive | 4284080 - 4284574 | 18501.4 |
| cysteine-rich secretory protein family protein | PEV8663_04221 | Not Available | Negative | 4284613 - 4285191 | 20391.1 |
| putative l,d-transpeptidase erfk/srfk precursor | PEV8663_04222 | Not Available | Positive | 4285362 - 4285961 | 22485.8 |
| hypothetical protein | PEV8663_04223 | Not Available | Positive | 4286105 - 4286296 | 6334.87 |
| ferrochelatase | PEV8663_04224 | Not Available | Negative | 4286376 - 4287416 | 39278.9 |
| biotin biosynthesis protein bioc | PEV8663_04225 | Not Available | Negative | 4287472 - 4288296 | 30290.4 |
| dna utilization protein gntx | PEV8663_04226 | Not Available | Positive | 4288308 - 4289039 | 26285.0 |
| glutaredoxin-3 | PEV8663_04227 | Not Available | Positive | 4289078 - 4289335 | 9302.29 |
| (r)-stereoselective amidase | PEV8663_04228 | Not Available | Positive | 4289335 - 4290168 | 29865.6 |
| marr family protein | PEV8663_04229 | Not Available | Positive | 4290165 - 4290614 | 16254.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
