Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose mutarotase | PEV8663_00288 | Not Available | Positive | 280480 - 280809 | 12639.1 |
| 2-keto-3-deoxy-l-fuconate dehydrogenase | PEV8663_00289 | Not Available | Positive | 280813 - 281562 | 25827.8 |
| ureidoglycolate lyase | PEV8663_00290 | Not Available | Positive | 281579 - 282421 | 29880.5 |
| l-fuconate dehydratase | PEV8663_00291 | Not Available | Positive | 282421 - 283707 | 47756.2 |
| hypothetical protein | PEV8663_00292 | Not Available | Positive | 283875 - 285374 | 53639.6 |
| outer membrane porin f precursor | PEV8663_00293 | Not Available | Positive | 285521 - 286390 | 31416.8 |
| hypothetical protein | PEV8663_00294 | Not Available | Positive | 286534 - 287505 | 35055.8 |
| caspase domain protein | PEV8663_00295 | Not Available | Positive | 287582 - 291031 | 124234.0 |
| hypothetical protein | PEV8663_00296 | Not Available | Positive | 291046 - 291996 | 34138.4 |
| outer membrane porin f precursor | PEV8663_00297 | Not Available | Positive | 292028 - 292762 | 25993.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
