Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tim44-like domain protein | PEV8663_04180 | Not Available | Negative | 4243908 - 4244564 | 23903.2 |
| phage t7 f exclusion suppressor fxsa | PEV8663_04181 | Not Available | Positive | 4244669 - 4245172 | 18177.1 |
| protein-export protein secb | PEV8663_04182 | Not Available | Positive | 4245254 - 4245745 | 18227.8 |
| dna polymerase iii subunit epsilon | PEV8663_04183 | Not Available | Negative | 4245760 - 4246488 | 26602.6 |
| dephospho-coa kinase | PEV8663_04184 | Not Available | Negative | 4246481 - 4247074 | 21366.7 |
| shikimate dehydrogenase | PEV8663_04185 | Not Available | Negative | 4247071 - 4247904 | 30107.5 |
| maf-like protein ycef | PEV8663_04186 | Not Available | Negative | 4247901 - 4248452 | 20545.7 |
| hypothetical protein | PEV8663_04187 | Not Available | Positive | 4248489 - 4248785 | 11691.4 |
| hypothetical protein | PEV8663_04188 | Not Available | Positive | 4249013 - 4250284 | 47542.1 |
| trna modification gtpase mnme | PEV8663_04189 | Not Available | Positive | 4250292 - 4251575 | 45418.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
