Pelagimonas varians strain CECT 8663

rodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pelagimonas

Description

Pelagimonas varians strain CECT 8663 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain exhibits mesophilic growth, with an optimal temperature for proliferation identified at 29°C. The genomic structure of Pelagimonas varians strain CECT 8663 is notable for having a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and survival in specific ecological niches. The strain is cataloged under the accession number FXYH00000000.1, which serves as a reference for its genomic data. Understanding the traits of Pelagimonas varians strain CECT 8663 can offer insights into its ecological role, particularly in marine environments where similar aerobic, mesophilic bacteria are often integral to nutrient cycling and organic matter degradation. The reliance on aerobic conditions suggests that this strain may play a significant role in the decomposition of organic materials in oxygen-rich aquatic ecosystems, contributing to the overall health and function of these environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPelagimonas
SpeciesPelagimonas varians
Strainstrain CECT 8663

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
Habitatgut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pelagimonas varians strain CECT 8663 genome assembly, contig:

Gene Summary

Adenine Count

1099218 bp

Thymine Count

1095060 bp

Guanine Count

1341998 bp

Cytosine Count

1360831 bp

Genome Length

4897107 bp

Protein-coding Genes

4651 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
choline transport atp-binding protein opubaPEV8663_04060Not AvailablePositive4125526 - 412734966101.4
hypothetical proteinPEV8663_04061Not AvailablePositive4127460 - 412796018076.6
dna polymerase iii polc-typePEV8663_04062Not AvailablePositive4127962 - 412937150683.2
3-oxoacyl-[acyl-carrier-protein] reductase fabgPEV8663_04063Not AvailableNegative4129438 - 413019926219.7
sialic acid trap transporter permease protein siatPEV8663_04064Not AvailableNegative4130251 - 413156746401.4
tripartite atp-independent periplasmic transporters, dctq componentPEV8663_04065Not AvailableNegative4131564 - 413215720873.2
hypothetical proteinPEV8663_04066Not AvailableNegative4132277 - 413310430065.9
toluene-4-sulfonate monooxygenase system iron-sulfur subunit tsam1PEV8663_04067Not AvailableNegative4133110 - 413415038939.3
hypothetical proteinPEV8663_04068Not AvailableNegative4134272 - 41345057960.49
blue-light-activated proteinPEV8663_04069Not AvailableNegative4134698 - 413724491432.0

Displaying genes 4061 – 4070 of 4793 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.