Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s4 | PEV8663_04040 | Not Available | Positive | 4108121 - 4108741 | 23701.6 |
| hypothetical protein | PEV8663_04041 | Not Available | Negative | 4108880 - 4109095 | 8016.58 |
| hypothetical protein | PEV8663_04042 | Not Available | Negative | 4109499 - 4110185 | 25519.2 |
| hypothetical protein | PEV8663_04043 | Not Available | Negative | 4110207 - 4111409 | 46169.9 |
| hth-type transcriptional regulator gntr | PEV8663_04044 | Not Available | Negative | 4111406 - 4112431 | 37158.9 |
| Trna-arg | Not Available | Not Available | Positive | 4112552 - 4112628 | Not Available |
| hypothetical protein | PEV8663_04046 | Not Available | Positive | 4112853 - 4113638 | 28442.7 |
| bacterial mobilization protein (mobc) | PEV8663_04047 | Not Available | Positive | 4113680 - 4114108 | 15311.6 |
| dna relaxase mbea | PEV8663_04048 | Not Available | Positive | 4114102 - 4115625 | 56644.3 |
| putative hth-type transcriptional regulator yddm | PEV8663_04049 | Not Available | Negative | 4115622 - 4115918 | 10946.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
