Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PEV8663_03482 | Not Available | Negative | 3527700 - 3528032 | 12364.0 |
| 23s rrna (guanosine-2'-o-)-methyltransferase rlmb | PEV8663_03483 | Not Available | Negative | 3528359 - 3529138 | 27850.6 |
| Trna-pseudo | Not Available | Not Available | Positive | 3529270 - 3529353 | Not Available |
| putative oxidoreductase ycjs | PEV8663_03485 | Not Available | Negative | 3529793 - 3530929 | 40199.1 |
| xylose isomerase-like tim barrel | PEV8663_03486 | Not Available | Negative | 3530941 - 3531681 | 26934.9 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | PEV8663_03487 | Not Available | Negative | 3531736 - 3532818 | 39373.6 |
| l-arabinose transport system permease protein araq | PEV8663_03488 | Not Available | Negative | 3532823 - 3533728 | 33165.1 |
| lactose transport system permease protein lacf | PEV8663_03489 | Not Available | Negative | 3533721 - 3534614 | 33097.3 |
| putative sugar-binding periplasmic protein precursor | PEV8663_03490 | Not Available | Negative | 3534711 - 3535937 | 43054.7 |
| hth-type transcriptional regulator rafr | PEV8663_03491 | Not Available | Positive | 3536126 - 3537184 | 39579.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
