Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trimethylamine methyltransferase (mttb) | PEV8663_03362 | Not Available | Negative | 3414366 - 3415916 | 56998.2 |
| aldehyde dehydrogenase puuc | PEV8663_03363 | Not Available | Negative | 3415913 - 3417385 | 52425.2 |
| 4-hydroxy-tetrahydrodipicolinate synthase | PEV8663_03364 | Not Available | Negative | 3417382 - 3418290 | 32630.4 |
| hth-type transcriptional repressor csir | PEV8663_03365 | Not Available | Negative | 3418280 - 3418984 | 26149.3 |
| hypothetical protein | PEV8663_03366 | Not Available | Negative | 3419136 - 3419246 | 4159.18 |
| outer membrane porin f precursor | PEV8663_03367 | Not Available | Negative | 3419854 - 3421806 | 71227.0 |
| hypothetical protein | PEV8663_03368 | Not Available | Negative | 3421868 - 3422239 | 13551.7 |
| hypothetical protein | PEV8663_03369 | Not Available | Negative | 3422462 - 3423877 | 51488.5 |
| hth-type transcriptional regulator virs | PEV8663_03370 | Not Available | Positive | 3423985 - 3424998 | 37064.6 |
| transposase is116/is110/is902 family protein | PEV8663_03371 | Not Available | Negative | 3425532 - 3426635 | 40780.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
