Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-binding atpase ychf | PEV8663_03322 | Not Available | Negative | 3374419 - 3375516 | 39708.2 |
| multidrug resistance protein mdtk | PEV8663_03323 | Not Available | Negative | 3375571 - 3376932 | 48760.2 |
| hypothetical protein | PEV8663_03324 | Not Available | Positive | 3377058 - 3377702 | 24693.1 |
| polyphosphate kinase 2 (ppk2) | PEV8663_03325 | Not Available | Negative | 3377734 - 3378750 | 38137.9 |
| tryptophan synthase alpha chain | PEV8663_03326 | Not Available | Positive | 3378933 - 3379724 | 28011.7 |
| autoinducer 2 sensor kinase/phosphatase luxq | PEV8663_03327 | Not Available | Negative | 3379712 - 3380833 | 40329.6 |
| l-lactate dehydrogenase | PEV8663_03328 | Not Available | Positive | 3380993 - 3382156 | 43151.9 |
| inner membrane protein ybjj | PEV8663_03329 | Not Available | Negative | 3382198 - 3383340 | 39712.8 |
| alkaline phosphatase pafa precursor | PEV8663_03330 | Not Available | Negative | 3383484 - 3385184 | 61820.8 |
| 50s ribosomal protein l25 | PEV8663_03331 | Not Available | Positive | 3385435 - 3386064 | 22538.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
