Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-hydantoinase/dihydropyrimidinase | PEV8663_03302 | Not Available | Negative | 3351322 - 3352785 | 53514.3 |
| n-carbamoyl-l-amino acid hydrolase | PEV8663_03303 | Not Available | Negative | 3352926 - 3354173 | 45280.9 |
| hth-type transcriptional regulator rutr | PEV8663_03304 | Not Available | Positive | 3354346 - 3354993 | 24154.5 |
| hth-type transcriptional regulator rutr | PEV8663_03305 | Not Available | Positive | 3354990 - 3355616 | 23505.3 |
| hypothetical protein | PEV8663_03306 | Not Available | Positive | 3355744 - 3356118 | 14153.0 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | PEV8663_03307 | Not Available | Negative | 3356232 - 3357536 | 47165.3 |
| nad-dependent dihydropyrimidine dehydrogenase subunit pret | PEV8663_03308 | Not Available | Negative | 3357536 - 3358876 | 46221.7 |
| hth-type transcriptional regulator gntr | PEV8663_03309 | Not Available | Negative | 3359018 - 3360001 | 34635.7 |
| 2-(hydroxymethyl)glutarate dehydrogenase | PEV8663_03310 | Not Available | Positive | 3360106 - 3361002 | 30516.4 |
| methylglyoxal synthase | PEV8663_03311 | Not Available | Positive | 3361006 - 3361380 | 13384.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
