Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter periplasmic-binding protein ytfq precursor | PEV8663_03150 | Not Available | Positive | 3188050 - 3189024 | 34786.2 |
| ribose import atp-binding protein rbsa | PEV8663_03151 | Not Available | Positive | 3189103 - 3190620 | 54396.8 |
| ribose transport system permease protein rbsc | PEV8663_03152 | Not Available | Positive | 3190617 - 3191597 | 33467.3 |
| ribose transport system permease protein rbsc | PEV8663_03153 | Not Available | Positive | 3191600 - 3192601 | 34657.2 |
| mandelate racemase | PEV8663_03154 | Not Available | Positive | 3192598 - 3193689 | 39187.8 |
| hth-type transcriptional activator cmpr | PEV8663_03155 | Not Available | Negative | 3193739 - 3194662 | 33073.6 |
| fatty acid hydroxylase superfamily protein | PEV8663_03156 | Not Available | Positive | 3194768 - 3195748 | 38240.6 |
| hypothetical protein | PEV8663_03157 | Not Available | Negative | 3196063 - 3196629 | 21752.0 |
| hypothetical protein | PEV8663_03158 | Not Available | Positive | 3197547 - 3199742 | 76324.9 |
| zinc-type alcohol dehydrogenase-like protein | PEV8663_03159 | Not Available | Negative | 3199912 - 3200946 | 36477.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
