Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative inner membrane protein | PEV8663_03040 | Not Available | Positive | 3065721 - 3066782 | 37086.1 |
| inner membrane transport permease yadh | PEV8663_03041 | Not Available | Negative | 3066890 - 3067651 | 27925.1 |
| daunorubicin/doxorubicin resistance atp-binding protein drra | PEV8663_03042 | Not Available | Negative | 3067648 - 3068589 | 34239.4 |
| riboflavin transporter | PEV8663_03043 | Not Available | Positive | 3068741 - 3069718 | 35474.1 |
| uroporphyrinogen decarboxylase | PEV8663_03044 | Not Available | Negative | 3069736 - 3070767 | 37653.1 |
| porphobilinogen deaminase | PEV8663_03045 | Not Available | Positive | 3070867 - 3071823 | 34517.6 |
| phthiocerol synthesis polyketide synthase type i ppsc | PEV8663_03046 | Not Available | Negative | 3071939 - 3072922 | 34445.6 |
| hypothetical protein | PEV8663_03047 | Not Available | Negative | 3072992 - 3073681 | 25101.0 |
| hypothetical protein | PEV8663_03048 | Not Available | Positive | 3074087 - 3075832 | 63794.8 |
| d-alanyl-d-alanine carboxypeptidase dacf precursor | PEV8663_03049 | Not Available | Negative | 3075843 - 3077315 | 52649.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
