Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhomboid family protein | PEV8663_03030 | Not Available | Negative | 3057581 - 3058267 | 24776.9 |
| tryptophan--trna ligase | PEV8663_03031 | Not Available | Positive | 3058342 - 3059373 | 37704.2 |
| hypothetical protein | PEV8663_03032 | Not Available | Negative | 3059423 - 3060058 | 23168.9 |
| holliday junction atp-dependent dna helicase ruvb | PEV8663_03033 | Not Available | Negative | 3060124 - 3061152 | 37232.2 |
| holliday junction atp-dependent dna helicase ruva | PEV8663_03034 | Not Available | Negative | 3061171 - 3061842 | 23108.1 |
| crossover junction endodeoxyribonuclease ruvc | PEV8663_03035 | Not Available | Negative | 3061839 - 3062327 | 17211.1 |
| hypothetical protein | PEV8663_03036 | Not Available | Positive | 3062637 - 3062843 | 7379.57 |
| hypothetical protein | PEV8663_03037 | Not Available | Negative | 3062923 - 3063267 | 12923.9 |
| ribosomal protein l11 methyltransferase | PEV8663_03038 | Not Available | Negative | 3063372 - 3064244 | 30463.1 |
| major facilitator superfamily protein | PEV8663_03039 | Not Available | Negative | 3064308 - 3065537 | 45263.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
