Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,2-dialkylglycine decarboxylase | PEV8663_02919 | Not Available | Positive | 2940905 - 2942188 | 46405.2 |
| homoserine kinase | PEV8663_02920 | Not Available | Positive | 2942185 - 2943117 | 34769.5 |
| membrane-bound lytic murein transglycosylase b precursor | PEV8663_02921 | Not Available | Negative | 2943121 - 2944356 | 44396.4 |
| l-aspartate dehydrogenase | PEV8663_02922 | Not Available | Negative | 2944465 - 2945259 | 27179.6 |
| xanthine permease xanp | PEV8663_02923 | Not Available | Negative | 2945376 - 2946614 | 42559.6 |
| ribonucleoside-diphosphate reductase nrdz | PEV8663_02924 | Not Available | Negative | 2947066 - 2949348 | 83744.8 |
| hypothetical protein | PEV8663_02925 | Not Available | Positive | 2949496 - 2949927 | 16008.4 |
| hypothetical protein | PEV8663_02926 | Not Available | Positive | 2950024 - 2950404 | 14008.7 |
| hypothetical protein | PEV8663_02927 | Not Available | Negative | 2950414 - 2950971 | 19691.8 |
| disulfide-bond oxidoreductase yghu | PEV8663_02928 | Not Available | Positive | 2951045 - 2951899 | 32188.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
