Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | PEV8663_02909 | Not Available | Negative | 2931013 - 2931402 | 14304.2 |
| transcriptional regulator slya | PEV8663_02910 | Not Available | Positive | 2931511 - 2931948 | 16204.5 |
| hypothetical protein | PEV8663_02911 | Not Available | Negative | 2931937 - 2933166 | 43105.4 |
| aldehyde dehydrogenase puuc | PEV8663_02912 | Not Available | Negative | 2933176 - 2934660 | 51534.2 |
| tripartite tricarboxylate transporter tcta family protein | PEV8663_02913 | Not Available | Negative | 2934666 - 2936183 | 54024.1 |
| tripartite tricarboxylate transporter tctb family protein | PEV8663_02914 | Not Available | Negative | 2936197 - 2936736 | 20253.4 |
| tripartite tricarboxylate transporter family receptor | PEV8663_02915 | Not Available | Negative | 2936808 - 2937752 | 32761.1 |
| pectin degradation repressor protein kdgr | PEV8663_02916 | Not Available | Positive | 2937887 - 2938696 | 28862.5 |
| taurine--pyruvate aminotransferase | PEV8663_02917 | Not Available | Positive | 2938693 - 2940042 | 48001.4 |
| ribonuclease bn | PEV8663_02918 | Not Available | Positive | 2940051 - 2940908 | 30964.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
