Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazolonepropionase | PEV8663_02889 | Not Available | Positive | 2907839 - 2909050 | 42769.5 |
| histidine ammonia-lyase | PEV8663_02890 | Not Available | Positive | 2909047 - 2910585 | 53366.7 |
| n-formylglutamate amidohydrolase | PEV8663_02891 | Not Available | Positive | 2910582 - 2911382 | 28875.1 |
| urocanate hydratase | PEV8663_02892 | Not Available | Positive | 2911379 - 2913046 | 60703.0 |
| mannosyl-d-glycerate transport/metabolism system repressor mngr | PEV8663_02893 | Not Available | Negative | 2913090 - 2913779 | 25892.8 |
| toluene-4-sulfonate monooxygenase system iron-sulfur subunit tsam1 | PEV8663_02894 | Not Available | Negative | 2914103 - 2915143 | 39370.9 |
| glycine cleavage system transcriptional activator | PEV8663_02895 | Not Available | Negative | 2915256 - 2916158 | 33373.3 |
| cytosine deaminase | PEV8663_02896 | Not Available | Negative | 2916294 - 2917580 | 46450.2 |
| branched-chain amino acid transport system / permease component | PEV8663_02897 | Not Available | Negative | 2917580 - 2918524 | 33250.6 |
| beta-methylgalactoside transporter inner membrane component | PEV8663_02898 | Not Available | Negative | 2918526 - 2919575 | 36819.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
