Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose import atp-binding protein rbsa | PEV8663_02829 | Not Available | Positive | 2837728 - 2839275 | 55082.7 |
| ribose transport system permease protein rbsc | PEV8663_02830 | Not Available | Positive | 2839272 - 2840249 | 33834.0 |
| autoinducer 2 import system permease protein lsrd | PEV8663_02831 | Not Available | Positive | 2840246 - 2841247 | 35222.6 |
| l-rhamnose mutarotase | PEV8663_02832 | Not Available | Positive | 2841252 - 2841566 | 12189.7 |
| l-fuculokinase | PEV8663_02833 | Not Available | Positive | 2841563 - 2842933 | 48761.0 |
| glycine betaine transporter opud | PEV8663_02834 | Not Available | Negative | 2843005 - 2844687 | 59690.6 |
| hth-type transcriptional regulator gltr | PEV8663_02835 | Not Available | Positive | 2844868 - 2845788 | 33283.0 |
| pyridoxal 4-dehydrogenase | PEV8663_02836 | Not Available | Negative | 2845873 - 2846922 | 37870.8 |
| putative hth-type transcriptional regulator ydfh | PEV8663_02837 | Not Available | Negative | 2846934 - 2847632 | 26368.0 |
| d-galactarate dehydratase | PEV8663_02838 | Not Available | Positive | 2847733 - 2849256 | 53446.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
