Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein l,d-transpeptidase | PEV8663_00118 | Not Available | Negative | 122147 - 123784 | 61219.4 |
| peptidase m15 | PEV8663_00119 | Not Available | Positive | 124124 - 124693 | 20816.1 |
| Trna-asp | Not Available | Not Available | Positive | 124982 - 125058 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 125093 - 125169 | Not Available |
| peptidoglycan-n-acetylglucosamine deacetylase | PEV8663_00122 | Not Available | Positive | 125418 - 126185 | 28312.2 |
| hypothetical protein | PEV8663_00123 | Not Available | Negative | 126249 - 127052 | 28819.5 |
| hypothetical protein | PEV8663_00124 | Not Available | Positive | 127166 - 127528 | 13101.7 |
| hypothetical protein | PEV8663_00125 | Not Available | Positive | 127578 - 128186 | 21177.1 |
| hypothetical protein | PEV8663_00126 | Not Available | Positive | 128227 - 128973 | 26491.1 |
| iron-binding protein isca | PEV8663_00127 | Not Available | Positive | 129003 - 129386 | 14089.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
