Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph azoreductase | PEV8663_02658 | Not Available | Positive | 2664449 - 2665003 | 19682.4 |
| virulence protein | PEV8663_02659 | Not Available | Negative | 2665000 - 2665398 | 14532.3 |
| putative undecaprenyl-phosphate n-acetylgalactosaminyl 1-phosphate transferase | PEV8663_02660 | Not Available | Negative | 2665515 - 2666204 | 25888.9 |
| ribonuclease d | PEV8663_02661 | Not Available | Positive | 2667160 - 2667774 | 22642.2 |
| lipopolysaccharide-assembly, lptc-related | PEV8663_02662 | Not Available | Positive | 2667809 - 2668414 | 21549.0 |
| lipopolysaccharide transport periplasmic protein lpta | PEV8663_02663 | Not Available | Positive | 2668424 - 2668909 | 16932.2 |
| lipopolysaccharide export system atp-binding protein lptb | PEV8663_02664 | Not Available | Positive | 2668909 - 2669667 | 27916.8 |
| putative sigma-54 modulation protein | PEV8663_02665 | Not Available | Positive | 2669919 - 2670482 | 20651.5 |
| nitrogen regulatory protein | PEV8663_02666 | Not Available | Positive | 2670523 - 2670987 | 16632.1 |
| hypothetical protein | PEV8663_02667 | Not Available | Negative | 2671077 - 2672507 | 53571.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
