Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine phosphatase | PEV8663_02608 | Not Available | Negative | 2615864 - 2616727 | 30256.5 |
| dna polymerase iv | PEV8663_02609 | Not Available | Negative | 2616855 - 2618513 | 60354.5 |
| cytochrome c-556 | PEV8663_02610 | Not Available | Positive | 2618615 - 2619052 | 15381.7 |
| sepiapterin reductase | PEV8663_02611 | Not Available | Negative | 2619112 - 2619969 | 29985.9 |
| hth-type transcriptional repressor bm3r1 | PEV8663_02612 | Not Available | Negative | 2619972 - 2620559 | 21398.0 |
| s-(hydroxymethyl)glutathione dehydrogenase | PEV8663_02613 | Not Available | Positive | 2620706 - 2621818 | 39162.4 |
| acetyltransferase (gnat) family protein | PEV8663_02614 | Not Available | Positive | 2621896 - 2622384 | 17750.2 |
| membrane transport protein | PEV8663_02615 | Not Available | Negative | 2622392 - 2623303 | 31826.8 |
| caax amino terminal protease self- immunity | PEV8663_02616 | Not Available | Positive | 2623430 - 2624329 | 32147.4 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit beta | PEV8663_02617 | Not Available | Positive | 2624391 - 2625305 | 33741.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
