Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protein kinase ubib | PEV8663_02438 | Not Available | Negative | 2410841 - 2412373 | 56337.8 |
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | PEV8663_02439 | Not Available | Negative | 2412375 - 2413130 | 28011.5 |
| formamidopyrimidine-dna glycosylase | PEV8663_02440 | Not Available | Positive | 2413300 - 2414151 | 31277.6 |
| putative enoyl-coa hydratase echa8 | PEV8663_02441 | Not Available | Positive | 2414216 - 2414992 | 28002.8 |
| 30s ribosomal protein s20 | PEV8663_02442 | Not Available | Positive | 2415226 - 2415489 | 9497.63 |
| chromosomal replication initiator protein dnaa | PEV8663_02443 | Not Available | Positive | 2415968 - 2417320 | 50640.0 |
| dna polymerase iii subunit beta | PEV8663_02444 | Not Available | Positive | 2417492 - 2418610 | 40526.1 |
| dna replication and repair protein recf | PEV8663_02445 | Not Available | Positive | 2418678 - 2419784 | 40231.1 |
| dna gyrase subunit b | PEV8663_02446 | Not Available | Positive | 2419972 - 2422389 | 89343.4 |
| hypothetical protein | PEV8663_02447 | Not Available | Positive | 2423411 - 2423923 | 18638.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
