Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph dehydrogenase | PEV8663_02358 | Not Available | Negative | 2332700 - 2334994 | 84734.3 |
| rmld substrate binding domain protein | PEV8663_02359 | Not Available | Positive | 2335272 - 2336585 | 45820.1 |
| hypothetical protein | PEV8663_02360 | Not Available | Positive | 2336585 - 2337058 | 17337.7 |
| group 3 truncated hemoglobin ctb | PEV8663_02361 | Not Available | Negative | 2337062 - 2337478 | 15834.2 |
| isoleucine--trna ligase | PEV8663_02362 | Not Available | Positive | 2337747 - 2340686 | 110777.0 |
| putative trna (cytidine(34)-2'-o)-methyltransferase | PEV8663_02363 | Not Available | Positive | 2340800 - 2341273 | 17977.6 |
| sialic acid trap transporter permease protein siat | PEV8663_02364 | Not Available | Negative | 2341349 - 2342662 | 46436.5 |
| tripartite atp-independent periplasmic transporters, dctq component | PEV8663_02365 | Not Available | Negative | 2342659 - 2343246 | 21353.4 |
| sialic acid-binding periplasmic protein siap precursor | PEV8663_02366 | Not Available | Negative | 2343358 - 2344398 | 37612.9 |
| hypothetical protein | PEV8663_02367 | Not Available | Negative | 2344678 - 2344848 | 6300.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
